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1

Energy Transfer in the Peridinin Chlorophyll-a Protein of Amphidinium carterae Studied by Polarized Transient Absorption and Target Analysis

Krueger, Brent P., Lampoura, Stefania S., van Stokkum, Ivo H.M., Papagiannakis, Emmanouil, Salverda, Jante M., Gradinaru, Claudiu C., Rutkauskas, Danielis, Hiller, Roger G., van Grondelle, Rienk

Journal:

Biophysical Journal

Year:

2001

Language:

english

File:

PDF, 244 KB

english, 2001

2

The Effect of Intrachain Electrostatic Repulsion on Conformational Disorder and Dynamics of the Sic1 Protein

Liu, Baoxu, Chia, Darius, Csizmok, Veronika, Farber, Patrick, Forman-Kay, Julie D., Gradinaru, Claudiu C.

Journal:

Journal of Physical Chemistry B

Year:

2014

Language:

english

File:

PDF, 1.66 MB

english, 2014

3

Artificially Induced Protein–Membrane Anchorage with Cholesterol-Based Recognition Agents as a New Therapeutic Concept

Miriam Avadisian, Dr. Steven Fletcher, Baoxu Liu, Dr. Wei Zhao, Dr. Peibin Yue, Daniel Badali, Dr. Wei Xu, Dr. Aaron D. Schimmer, Prof. Dr. James Turkson, Prof. Dr. Claudiu C. Gradinaru, Prof. Dr. Pat

Journal:

Angewandte Chemie

Year:

2011

Language:

english

File:

PDF, 1.27 MB

english, 2011

4

Artificially Induced Protein–Membrane Anchorage with Cholesterol-Based Recognition Agents as a New Therapeutic Concept

Miriam Avadisian, Dr. Steven Fletcher, Baoxu Liu, Dr. Wei Zhao, Dr. Peibin Yue, Daniel Badali, Dr. Wei Xu, Dr. Aaron D. Schimmer, Prof. Dr. James Turkson, Prof. Dr. Claudiu C. Gradinaru, Prof. Dr. Pat

Journal:

Angewandte Chemie International Edition

Year:

2011

Language:

english

File:

PDF, 1.27 MB

english, 2011

5

On the performance of bioanalytical fluorescence correlation spectroscopy measurements in a multiparameter photon-counting microscope

Amir Mazouchi, Baoxu Liu, Abdullah Bahram, Claudiu C. Gradinaru

Journal:

Analytica Chimica Acta

Year:

2011

Language:

english

File:

PDF, 879 KB

english, 2011

6

A Photostable, pH-Invariant Fluorescein Derivative for Single-Molecule Microscopy

Baoxu Liu, Steven Fletcher, Miriam Avadisian, Patrick T. Gunning, Claudiu C. Gradinaru

Journal:

Journal of Fluorescence

Year:

2009

Language:

english

File:

PDF, 248 KB

english, 2009

7

A mixed film composed of oligonucleotides and poly(2-hydroxyethyl methacrylate) brushes to enhance selectivity for detection of single nucleotide polymorphisms

April K.Y. Wong, Denys O. Marushchak, Claudiu C. Gradinaru, Ulrich J. Krull

Journal:

Analytica Chimica Acta

Year:

2010

Language:

english

File:

PDF, 779 KB

english, 2010

8

Simultaneous atomic-force and two-photon fluorescence imaging of biological specimens in vivo

Claudiu C. Gradinaru, Peter Martinsson, Thijs J. Aartsma, Thomas Schmidt

Journal:

Ultramicroscopy

Year:

2004

Language:

english

File:

PDF, 537 KB

english, 2004

9

Liposome−Hydrogel Bead Complexes Prepared via Biotin−Avidin Conjugation

MacKinnon, Neil, Guérin, Gérald, Liu, Baoxu, Gradinaru, Claudiu C., Macdonald, Peter M.

Journal:

Year:

2009

Language:

english

File:

PDF, 3.36 MB

english, 2009

10

Spectroscopic characterization of the spinach Lhcb4 protein (CP29), a minor light-harvesting complex of photosystem II

Andy Pascal, Claudiu Gradinaru, Ulrich Wacker, Erwin Peterman, Florentine Calkoen, Klaus-Dieter Irrgang, Peter Horton, Gernot Renger, Rienk van Grondelle, Bruno Robert, Herbert van Amerongen

Journal:

Year:

1999

Language:

english

File:

PDF, 549 KB

english, 1999

11

Fluorescence anisotropy: from single molecules to live cells

Gradinaru, Claudiu C., Marushchak, Denys O., Samim, Masood, Krull, Ulrich J.

Journal:

The Analyst (Royal Society of Chemistry)

Year:

2010

Language:

english

File:

PDF, 267 KB

english, 2010

12

Stark spectroscopy of the light-harvesting complex II in different oligomerisation states

Miguel A. Palacios, Raoul N. Frese, Claudiu C. Gradinaru, I.H.M. van Stokkum, Lavanya L. Premvardhan, Peter Horton, Alexander V. Ruban, Rienk van Grondelle, Herbert van Amerongen

Journal:

Biochimica et Biophysica Acta (BBA) - Bioenergetics

Year:

2003

Language:

english

File:

PDF, 579 KB

english, 2003

13

Electrostatics and Intrinsic Disorder: A Single-Molecule Study of the Sic1 Protein

Liu, Baoxu, Csizmok, Veronika, Forman-Kay, Julie, Gradinaru, Claudiu

Journal:

Biophysical Journal

Year:

2012

Language:

english

File:

PDF, 67 KB

english, 2012

14

The Flow of Excitation Energy in LHCII Monomers: Implications for the Structural Model of the Major Plant Antenna

Gradinaru, Claudiu C., Özdemir, Sevgi, Gülen, Demet, van Stokkum, Ivo H.M., van Grondelle, Rienk, van Amerongen, Herbert

Journal:

Biophysical Journal

Year:

1998

Language:

english

File:

PDF, 233 KB

english, 1998

15

Phosphopeptide Selective Coordination Complexes as Promising Src Homology 2 Domain Mimetics

Drewry, Joel A., Duodu, Eugenia, Mazouchi, Amir, Spagnuolo, Paul, Burger, Steven, Gradinaru, Claudiu C., Ayers, Paul, Schimmer, Aaron D., Gunning, Patrick T.

Journal:

Inorganic Chemistry

Year:

2012

Language:

english

File:

PDF, 1.66 MB

english, 2012

16

Sub-Diffusion Decays in Fluorescence Correlation Spectroscopy: Dye Photophysics or Protein Dynamics?

Mazouchi, Amir, Bahram, Abdullah, Gradinaru, Claudiu C.

Journal:

Journal of Physical Chemistry B

Year:

2013

Language:

english

File:

PDF, 1.69 MB

english, 2013

17

Detection of a Thousand Copies of miRNA without Enrichment or Modification

Dodgson, Bryan J., Mazouchi, Amir, Wegman, David W., Gradinaru, Claudiu C., Krylov, Sergey N.

Journal:

Analytical Chemistry

Year:

2012

Language:

english

File:

PDF, 1016 KB

english, 2012

18

Size, Shape and Motions of the SH3 Domain of the Drosophila Adapter Protein Drk

Mazouchi, Amir, Rauscher, Sarah, Bahram, Abdullah, Poms, Rgis, Forman-Kay, Julie, Gradinaru, Claudiu

Journal:

Biophysical Journal

Year:

2012

Language:

english

File:

PDF, 41 KB

english, 2012

19

The Intrinsically Unstable SH3-DRKN Protein: Compactness, Conformations and Speed

Gradinaru, Claudiu, Mazouchi, Amir, Rauscher, Sarah, Pomes, Regis, Forman-Kay, Julie

Journal:

Biophysical Journal

Year:

2013

Language:

english

File:

PDF, 49 KB

english, 2013

20

Nature of the M2 Muscarinic Receptor Signaling Complex Revealed by Dual-Color FCS and FRET

Li, Yuchong, Shivnaraine, Rabindra V., Fernandes, Dennis D., Ji, Huiqiao, Huang, Fei, Wells, James W., Gradinaru, Claudiu C.

Journal:

Biophysical Journal

Year:

2014

Language:

english

File:

PDF, 45 KB

english, 2014

21

The Conformations of the DrkN SH3 Domain Studied by Single Molecule Fluorescence Spectroscopy

Zhang, Zhenfu, Mazouchi, Amir, Chong, Andrew, Forman-Kay, Julie, Gradinaru, Claudiu

Journal:

Biophysical Journal

Year:

2014

Language:

english

File:

PDF, 41 KB

english, 2014

22

Electrostatics-Dependent Shape of the Intrinsically-Disordered Protein Sic1

Gomes, Gregory W., Liu, Baoxu, Farber, Patrick, Csizmok, Veronika, Forman-Kay, Julie, Gradinaru, Claudiu C.

Journal:

Biophysical Journal

Year:

2014

Language:

english

File:

PDF, 40 KB

english, 2014

23

An Improved Method for Studying Single Proteins Trapped in Lipid Vesicles

Gradinaru, Claudiu C.

Journal:

Biophysical Journal

Year:

2011

Language:

english

File:

PDF, 59 KB

english, 2011

24

How Electrostatics Influences the Conformational Disorder and Dynamics of the Sic1 Protein: A Single-Molecule Study

Liu, Baoxu, Csizmok, Veronika, Farber, Patrick, Forman-Kay, Julie, Gradinaru, Claudiu C.

Journal:

Biophysical Journal

Year:

2014

Language:

english

File:

PDF, 74 KB

english, 2014

25

Energy Transfer in LHCII Monomers at 77K Studied by Sub-Picosecond Transient Absorption Spectroscopy

Kleima, Foske J., Gradinaru, Claudiu C., Calkoen, Florentine, van Stokkum, Ivo H. M., van Grondelle, Rienk, van Amerongen, Herbert

Journal:

Year:

1997

Language:

english

File:

PDF, 141 KB

english, 1997

26

Isolation of Monovalent Quantum Dot–Nucleic Acid Conjugates Using Magnetic Beads

Uddayasankar, Uvaraj, Zhang, Zhenfu, Shergill, Ravi T., Gradinaru, Claudiu C., Krull, Ulrich J.

Journal:

Bioconjugate Chemistry

Year:

2014

Language:

english

File:

PDF, 1.88 MB

english, 2014

27

Identifying the Pathways of Energy Transfer between Carotenoids and Chlorophylls in LHCII and CP29. A Multicolor, Femtosecond Pump−Probe Study

Gradinaru, Claudiu C., van Stokkum, Ivo H. M., Pascal, Andy A., van Grondelle, Rienk, van Amerongen, Herbert

Journal:

Journal of Physical Chemistry B

Year:

2000

Language:

english

File:

PDF, 188 KB

english, 2000

28

Trapping Single Molecules in Liposomes: Surface Interactions and Freeze−Thaw Effects

Liu, Baoxu, Mazouchi, Amir, Gradinaru, Claudiu C.

Journal:

Journal of Physical Chemistry B

Year:

2010

Language:

english

File:

PDF, 3.42 MB

english, 2010

29

Xanthophylls in Light-Harvesting Complex II of Higher Plants: Light Harvesting and Triplet Quenching †

Peterman, Erwin J. G., Gradinaru, Claudiu C., Calkoen, Florentine, Borst, Jeroen C., van Grondelle, Rienk, van Amerongen, Herbert

Journal:

Year:

1997

Language:

english

File:

PDF, 158 KB

english, 1997

30

Lipogels: Single-Lipid-Bilayer-Enclosed Hydrogel Spheres

Saleem, Qasim, Liu, Baoxu, Gradinaru, Claudiu C., Macdonald, Peter M.

Journal:

Biomacromolecules

Year:

2011

Language:

english

File:

PDF, 3.78 MB

english, 2011

31

Liposome-Coated Hydrogel Spheres: Delivery Vehicles with Tandem Release from Distinct Compartments

Saleem, Qasim, Zhang, Zhenfu, Gradinaru, Claudiu C., Macdonald, Peter M.

Journal:

Year:

2013

Language:

english

File:

PDF, 3.95 MB

english, 2013

32

Selective Interaction between Xanthophylls and Chlorophylls in LHCII Probed by Femtosecond Transient Absorption Spectroscopy

Gradinaru, Claudiu C., van Grondelle, Rienk, van Amerongen, Herbert

Journal:

Journal of Physical Chemistry B

Year:

2003

Language:

english

File:

PDF, 88 KB

english, 2003

33

Triggered Instability of Liposomes Bound to Hydrophobically Modified Core−Shell PNIPAM Hydrogel Beads

MacKinnon, Neil, Guérin, Gérald, Liu, Baoxu, Gradinaru, Claudiu C., Rubinstein, John L., Macdonald, Peter M.

Journal:

Year:

2010

Language:

english

File:

PDF, 3.79 MB

english, 2010

34

The Advanced Interdisciplinary Research Laboratory: A Student Team Approach to the Fourth-Year Research Thesis Project Experience

Piunno, Paul A. E., Boyd, Cleo, Barzda, Virginijus, Gradinaru, Claudiu C., Krull, Ulrich J., Stefanovic, Sasa, Stewart, Bryan

Journal:

Journal of Chemical Education

Year:

2014

Language:

english

File:

PDF, 309 KB

english, 2014

35

Simultaneous Time- and Wavelength-Resolved Fluorescence Microscopy of Single Molecules

Luong, A. Khai, Gradinaru, Claudiu C., Chandler, David W., Hayden, Carl C.

Journal:

Journal of Physical Chemistry B

Year:

2005

Language:

english

File:

PDF, 307 KB

english, 2005

36

Ultrafast Evolution of the Excited States in the Chlorophyll a/b Complex CP29 from Green Plants Studied by Energy-Selective Pump−Probe Spectroscopy †

Gradinaru, Claudiu C., Pascal, Andy A., van Mourik, Frank, Robert, Bruno, Horton, Peter, van Grondelle, Rienk, van Amerongen, Herbert

Journal:

Year:

1998

Language:

english

File:

PDF, 91 KB

english, 1998

37

Structure and Interactions of the Chlorophyll a Molecules in the Higher Plant Lhcb4 Antenna Protein

Pascal, Andy, Peterman, Erwin, Gradinaru, Claudiu, van Amerongen, Herbert, van Grondelle, Rienk, Robert, Bruno

Journal:

Journal of Physical Chemistry B

Year:

2000

Language:

english

File:

PDF, 105 KB

english, 2000

38

Ultrasensitive on-column laser-induced fluorescence in capillary electrophoresis using multiparameter confocal detection

Mazouchi, Amir, Dodgson, Bryan J., Wegman, David W., Krylov, Sergey N., Gradinaru, Claudiu C.

Journal:

The Analyst (Royal Society of Chemistry)

Year:

2012

Language:

english

File:

PDF, 743 KB

english, 2012

39

Src homology 2 domain proteomimetics: developing phosphopeptide selective receptors

Drewry, Joel A., Burger, Steven, Mazouchi, Amir, Duodu, Eugenia, Ayers, Paul, Gradinaru, Claudiu C., Gunning, Patrick T.

Journal:

Year:

2012

Language:

english

File:

PDF, 1.71 MB

english, 2012

40

Single Lipid Bilayer Deposition on Polymer Surfaces Using Bicelles

Saleem, Qasim, Zhang, Zhenfu, Petretic, Amy, Gradinaru, Claudiu C., Macdonald, Peter M.

Journal:

Biomacromolecules

Year:

2015

Language:

english

File:

PDF, 1.47 MB

english, 2015

41

SPIE Proceedings [SPIE SPIE BiOS - San Francisco, California, United States (Saturday 7 February 2015)] Colloidal Nanoparticles for Biomedical Applications X - Multifunctional perfluorocarbon nanoemulsions for cancer therapy and imaging

Parak, Wolfgang J., Osinski, Marek, Liang, Xing-Jie, Fernandes, Donald A., Fernandes, Dennis D., Wang, Yan J., Li, Yuchong, Gradinaru, Claudiu C., Rousseau, Dérick, Kolios, Michael C.

Year:

2015

Language:

english

File:

PDF, 426 KB

english, 2015

42

SPIE Proceedings [SPIE Photonics North 2009 - Quebec, Canada (Sunday 24 May 2009)] Photonics North 2009 - Development of methods to study the conformational dynamics of quantum dot-oligonucleotide conjugates by single molecule spectroscopy

Algar, W. Russ, Prigozhin, Maxim B., Liu, Baoxu, Krull, Ulrich J., Gradinaru, Claudiu C., Vallée, Réal

Year:

2009

Language:

english

File:

PDF, 558 KB

english, 2009

43

Conformations of a Metastable SH3 Domain Characterized by smFRET and an Excluded-Volume Polymer Model

Mazouchi, Amir, Zhang, Zhenfu, Bahram, Abdullah, Gomes, Gregory-Neal, Lin, Hong, Song, Jianhui, Chan, Hue Sun, Forman-Kay, Julie D., Gradinaru, Claudiu C.

Journal:

Biophysical Journal

Year:

2016

Language:

english

File:

PDF, 1.37 MB

english, 2016

44

A New Approach to Infer Size and Shape of Disordered Conformations of Proteins from Sm-FRET Data

Gomes, Gregory-Neal, Song, Jianhui, Chan, Hue-Sun, Gradinaru, Claudiu C.

Journal:

Biophysical Journal

Year:

2016

Language:

english

File:

PDF, 41 KB

english, 2016

45

In Vitro Studies of Multifunctional Perfluorocarbon Nanoemulsions for Cancer Therapy and Imaging

Fernandes, Donald A., Fernandes, Dennis D., Gradinaru, Claudiu C., Kolios, Michael C.

Journal:

Biophysical Journal

Year:

2016

Language:

english

File:

PDF, 39 KB

english, 2016

46

Single-Molecule Dissection of the Conformations, Dynamics and Binding of the Disordered 4E-BP2 Protein

Zhang, Zhenfu, Bah, Alaji, Sajjad, Hamda, Forman-Kay, Julie D., Gradinaru, Claudiu C.

Journal:

Biophysical Journal

Year:

2016

Language:

english

File:

PDF, 59 KB

english, 2016

47

Dimensions and Dynamics of Highly Cooperative Sic1-WD40 Binding: smFRET through a Polymer Physics Lens

Gomes, Gregory, Csizmok, Veronika, Song, Jianhui, Sun Chan, Hue, Forman-Kay, Julie, Gradinaru, Claudiu C.

Journal:

Biophysical Journal

Year:

2016

Language:

english

File:

PDF, 39 KB

english, 2016

48

Phase Change Nanoemulsions for Cancer Therapy and Imaging

Fernandes, Donald A., Fernandes, Dennis D., Wang, Yan J., Li, Yuchong, Gradinaru, Claudiu C., Rousseau, Dérick, Kolios, Michael C.

Journal:

Biophysical Journal

Year:

2015

Language:

english

File:

PDF, 58 KB

english, 2015

49

An Adequate Account of Excluded Volume Is Necessary To Infer Compactness and Asphericity of Disordered Proteins by Förster Resonance Energy Transfer

Song, Jianhui, Gomes, Gregory-Neal, Gradinaru, Claudiu C., Chan, Hue Sun

Journal:

Journal of Physical Chemistry B

Year:

2015

Language:

english

File:

PDF, 2.18 MB

english, 2015

50

SPIE Proceedings [SPIE Photonics North 2009 - Quebec, Canada (Sunday 24 May 2009)] Photonics North 2009 - Single-molecule fluorescence study of the inhibition of the oncogenic functionality of STAT3

Liu, Baoxu, Vallée, Réal, Badali, Daniel, Fletcher, Steven, Avadisian, Miriam, Gunning, Patrick, Gradinaru, Claudiu

Year:

2009

Language:

english

File:

PDF, 904 KB

english, 2009

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